Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fmn-binding glutamate synthase family proteinPP1Y_RS06160Not AvailableNegative5087 - 667358128.7
dienelactone hydrolase family proteinPP1Y_RS06165Not AvailableNegative6691 - 739225450.1
duf6489 family proteinPP1Y_RS06170Not AvailablePositive7513 - 77829668.67
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmePP1Y_RS06175Not AvailablePositive7827 - 910444979.6
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgPP1Y_RS06180Not AvailablePositive9174 - 1102166308.9
16s rrna (guanine(527)-n(7))-methyltransferase rsmgPP1Y_RS06185Not AvailablePositive11018 - 1165924057.2
para family proteinPP1Y_RS06190Not AvailablePositive11656 - 1243227751.5
parb/repb/spo0j family partition proteinPP1Y_RS06195Not AvailablePositive12429 - 1341535588.8
glycine zipper 2tm domain-containing proteinPP1Y_RS06200Not AvailableNegative13530 - 1415022076.2
gaf domain-containing proteinPP1Y_RS06205Not AvailableNegative14287 - 1476916887.1

Displaying genes 291 – 300 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.