Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinPP1Y_RS25560Not AvailablePositive3741327 - 374173414271.3
Putative tail proteinPP1Y_RS23675Not AvailablePositive3741744 - 374393976991.5
Ribonuclease iiiPP1Y_RS23680Not AvailablePositive3743963 - 374442116511.3
ompa family proteinPP1Y_RS23685Not AvailablePositive3744614 - 374566937409.6
Que-c like queosine biosynthesis proteinPP1Y_RS23690Not AvailableNegative3745832 - 374652724956.5
uroporphyrinogen decarboxylasePP1Y_RS06135Not AvailablePositive340 - 137137242.7
copd family proteinPP1Y_RS06140Not AvailablePositive1418 - 186116598.8
transcription termination factor rhoPP1Y_RS06145Not AvailablePositive2081 - 333746727.4
yjbe family putative metal transport proteinPP1Y_RS06150Not AvailablePositive3371 - 407524475.4
quinone oxidoreductase family proteinPP1Y_RS06155Not AvailableNegative4096 - 506433548.5

Displaying genes 281 – 290 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.