Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Major capsid protein precursorPP1Y_RS23620Not AvailablePositive3734264 - 373540039711.8
phage head-tail connector proteinPP1Y_RS23625Not AvailablePositive3735461 - 373600919919.7
hypothetical proteinPP1Y_RS23630Not AvailablePositive3736006 - 37361886641.0
Tail proteinPP1Y_RS23635Not AvailablePositive3736192 - 373658114285.2
Gene transfer aget (gta) orfg9-like phage major tail proteinPP1Y_RS23640Not AvailablePositive3736617 - 373702414045.4
gene transfer agent family proteinPP1Y_RS23645Not AvailablePositive3737021 - 373735311514.9
phage tail assembly chaperonePP1Y_RS23650Not AvailablePositive3737350 - 37375446844.17
Putative tail proteinPP1Y_RS23655Not AvailablePositive3737537 - 373811219199.6
Putative capsid and scaffold proteinPP1Y_RS23660Not AvailablePositive3738179 - 374050984561.7
Minor tail proteinPP1Y_RS23665Not AvailablePositive3740506 - 374133029691.0

Displaying genes 271 – 280 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.