Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eexn family lipoproteinPP1Y_RS00170Not AvailableNegative35255 - 355069154.07
type iv secretion system proteinPP1Y_RS00175Not AvailableNegative35509 - 3622824820.3
virb4 family type iv secretion/conjugal transfer atpasePP1Y_RS00180Not AvailableNegative36230 - 3859688464.0
type iv secretion system protein virb3PP1Y_RS00185Not AvailableNegative38589 - 3892712860.0
trbc/virb2 family proteinPP1Y_RS00190Not AvailableNegative38929 - 3924911125.9
lpd7 domain-containing proteinPP1Y_RS00195Not AvailableNegative39269 - 4013532221.2
lytic transglycosylase domain-containing proteinPP1Y_RS00200Not AvailableNegative40132 - 4073721033.9
hypothetical proteinPP1Y_RS00205Not AvailableNegative40734 - 4110212615.2
helix-turn-helix domain-containing proteinPP1Y_RS00210Not AvailablePositive41308 - 4186820174.7
helix-turn-helix domain-containing proteinPP1Y_RS00215Not AvailableNegative41860 - 420727443.26

Displaying genes 211 – 220 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.