Lachnospiraceae bacterium 5_1_63FAA

Anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Description

The Lachnospiraceae bacterium 5_1_63FAA is a Gram-positive, rod-shaped microbe that thrives in mesophilic temperatures, categorized as a Chemoheterotroph, and can inhabit all body sites in various species, including the human gut, skin, and respiratory tract, and is an Obligate Anaerobe. As a Gram-positive bacterium, it has a thick peptidoglycan layer in its cell wall, providing it with a rigid structure and contributing to its resistance to environmental stressors. Its rod shape allows for efficient movement and colonization in its host environment. The mesophilic temperature preference indicates that this bacterium grows best in moderate temperatures, typically between 20-45°C, which is consistent with the temperatures found in many animal hosts. As a Chemoheterotroph, the Lachnospiraceae bacterium 5_1_63FAA relies on organic compounds for energy and carbon, breaking down complex molecules into simpler ones to sustain its metabolic processes. Its ability to inhabit all body sites in various species suggests a high degree of adaptability and versatility. The absence of oxygen is crucial for its survival, as it is an Obligate Anaerobe, meaning it cannot tolerate oxygen and requires a strictly anaerobic environment to grow and thrive. This bacterium plays a significant role in the breakdown of complex polysaccharides and production of short-chain fatty acids, which can have a profound impact on the health and well-being of its host. The Lachnospiraceae bacterium 5_1_63FAA has been implicated in the regulation of the immune system and the maintenance of a healthy gut microbiome, with its metabolic byproducts influencing the expression of genes involved in inflammation and immune response.

Profile

Physiology
Gram staining propertiesUncharacterized
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnospiraceae bacterium 5_1_63FAA


Gene Summary

Adenine Count

843334 bp

Thymine Count

1058846 bp

Guanine Count

476888 bp

Cytosine Count

650487 bp

Genome Length

3029557 bp

Protein-coding Genes

2987 genes

Non-Coding Genes

118 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Helix-turn-helix transcriptional regulatorHMPREF0996_01495Not AvailablePositive1505812 - 15060248253.32
death domain-associated protein 6HMPREF0996_01496Not AvailablePositive1506161 - 150658616426.7
hypothetical proteinHMPREF0996_01497Not AvailablePositive1506603 - 15068369001.89
EndolysinHMPREF0996_01498Not AvailableNegative1506863 - 150760327661.5
Hypothetical proteinHMPREF0996_01499Not AvailableNegative1507606 - 15078337961.9
Hypothetical proteinHMPREF0996_01500Not AvailableNegative1507844 - 150816412626.2
hypothetical proteinHMPREF0996_01501Not AvailableNegative1508518 - 150889514430.7
Putative reverse transcriptaseHMPREF0996_01502Not AvailableNegative1508855 - 150972733780.3
Putative reverse transcriptaseHMPREF0996_01503Not AvailableNegative1509730 - 15099819964.13
Tail proteinHMPREF0996_01504Not AvailableNegative1510424 - 151231669233.1

Displaying genes 1 – 10 of 3105 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

346 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 346 metabolites

Health Effects

No health effects information available for this bacterium.