Hymenobacter psychrophilus

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Hymenobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusHymenobacter
SpeciesHymenobacter psychrophilus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hymenobacter psychrophilus strain CGMCC 1.8975 genome assembly,

Gene Summary

Adenine Count

927735 bp

Thymine Count

935279 bp

Guanine Count

1449501 bp

Cytosine Count

1444115 bp

Genome Length

4758215 bp

Protein-coding Genes

4176 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
competence/damage-inducible protein cinaSAMN04488069_102196Not AvailablePositive831838 - 83307344665.1
2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase)SAMN04488069_102197Not AvailablePositive833182 - 83455548066.7
hypothetical proteinSAMN04488069_102198Not AvailablePositive834770 - 8349737756.62
outer membrane receptor proteins, mostly fe transportSAMN04488069_102199Not AvailableNegative835071 - 83760892559.5
oligopeptidase bSAMN04488069_102200Not AvailableNegative837842 - 83989077167.9
valyl-trna synthetaseSAMN04488069_102201Not AvailableNegative840006 - 842702100931.0
predicted amidohydrolaseSAMN04488069_102202Not AvailablePositive842921 - 84385633323.9
hypothetical proteinSAMN04488069_102203Not AvailablePositive843909 - 8440826366.74
trna(ile)-lysidine synthase tils/mesjSAMN04488069_102204Not AvailablePositive844079 - 84507138072.1
4fe-4s dicluster domain-containing proteinSAMN04488069_102205Not AvailableNegative845225 - 84557512798.9

Displaying genes 711 – 720 of 4231 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.