Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter psychrophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927735 bp
Thymine Count
935279 bp
Guanine Count
1449501 bp
Cytosine Count
1444115 bp
Genome Length
4758215 bp
Protein-coding Genes
4176 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkane 1-monooxygenase | SAMN04488069_10329 | Not Available | Positive | 1198572 - 1199618 | 38849.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488069_10330 | Not Available | Positive | 1199813 - 1202911 | 108462.0 |
| hypothetical protein | SAMN04488069_10331 | Not Available | Negative | 1202991 - 1203545 | 19431.1 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN04488069_10332 | Not Available | Positive | 1203579 - 1204196 | 23025.4 |
| hypothetical protein | SAMN04488069_10333 | Not Available | Negative | 1204204 - 1204428 | 8145.85 |
| protein of unknown function | SAMN04488069_10334 | Not Available | Negative | 1204738 - 1206111 | 50444.0 |
| hypothetical protein | SAMN04488069_10335 | Not Available | Positive | 1206209 - 1211707 | 200025.0 |
| hypothetical protein | SAMN04488069_10336 | Not Available | Positive | 1211727 - 1212596 | 32717.2 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN04488069_10337 | Not Available | Negative | 1212615 - 1213211 | 22139.4 |
| penicillin-binding protein 1c | SAMN04488069_10338 | Not Available | Positive | 1213290 - 1215692 | 88011.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.