Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Hymenobacteraceae
Genus
Hymenobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Hymenobacteraceae |
| Genus | Hymenobacter |
| Species | Hymenobacter roseosalivarius |
| Strain | DSM 11622 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1078273 bp
Thymine Count
1080033 bp
Guanine Count
1403769 bp
Cytosine Count
1386393 bp
Genome Length
4948485 bp
Protein-coding Genes
4391 genes
Non-Coding Genes
42 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mazg nucleotide pyrophosphohydrolase | SAMN00120144_0368 | Not Available | Negative | 3010255 - 3010581 | 12302.5 |
| d-tyrosyl-trna(tyr) deacylase | SAMN00120144_0369 | Not Available | Negative | 3010609 - 3011058 | 16035.5 |
| hypothetical protein | SAMN00120144_0370 | Not Available | Positive | 3011236 - 3012756 | 56875.5 |
| aminodeoxychorismate lyase | SAMN00120144_0371 | Not Available | Negative | 3012842 - 3013915 | 40966.1 |
| methyltransferase type 11 | SAMN00120144_0372 | Not Available | Negative | 3013955 - 3014734 | 28202.0 |
| transcriptional regulator, xre family | SAMN00120144_0373 | Not Available | Negative | 3014851 - 3016338 | 56887.6 |
| malate synthase | SAMN00120144_0374 | Not Available | Positive | 3016519 - 3018147 | 61201.7 |
| isocitrate lyase | SAMN00120144_0375 | Not Available | Positive | 3018376 - 3018693 | 11635.6 |
| isocitrate lyase and phosphorylmutase | SAMN00120144_0376 | Not Available | Positive | 3018793 - 3019659 | 31385.3 |
| 3'-5' exonuclease | SAMN00120144_0377 | Not Available | Negative | 3019838 - 3021013 | 44391.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.