Lactobacillus johnsonii FI9785

Gram-positiveRodNon-motileMicroaerophilic

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lactobacillus

Description

Lactobacilli produce lactic acid and are used for many different things, including yogurt production and the maintenance of healthy intestinal microflora. Lactobacilli are commonly associated with the gastrointestinal tract of humans. The genome of the Lactobacillus plantarum has been sequenced and the genomes of several other Lactobacilli are underway. The goal of researchers is to better understand the roles, capabilities, and interactions of Lactobacilli.The genome of Lactobacillus plantarum has been sequenced. The genome is 3,308,274 bp long with 3,052 open-reading frames, and a G+C content of 44.5%. L. plantarum occupies many different niches in the environment including the human gastrointestinal tract. L. plantarum is very ecologically flexible as is reflected in the fact that it has one of the largest genomes of any of the lactic acid bacteria.The genome of Lactobacillus bulgaricus, which is currently in progress, is about 2.3 Mbp long with a G+C content of 50%. L. bulgaricus is one of the two bacteria required for the production of fermented milk and yogurt. The complete sequence of this genome will provide better understanding and control of this bacterium in the fermentation process.Lactobacilli are rod-shaped, Gram-positive, fermentative, organotrophs. They are usually straight, although they can form spiral or coccobacillary forms under certain conditions. They are often found in pairs or chains of varying length. Lactobacilli are classified as lactic acid bacteria, and derive almost all of their energy from the conversion of glucose to lactate during homolactic fermentation. In this process 85-90% of the sugar utilized is converted to lactic acid. They generate ATP by nonoxidative substrate-level phosphorylation.Lactobacilli are commonly associated with plant herbage. They have a generation time ranging from 25 minutes to several hundred minutes, and grow optimally between the temperatures of 30 and 40 degrees Celsius, although thermophilic strains can be comfortable at temperatures as high as 45 degrees Celsius. They are also commonly associated with the gastrointestinal tract of animals and humans. As natural GI microflora they are believed to perform several beneficial roles including immunomodulation, interference with enteric pathogens, and maintenance of healthy intestinal microflora. Lactobacillus gasseri appears to be the main species of lactobacilli that inhabits the human gastrointestinal tract. (From http://microbewiki.kenyon.edu/index.php/Lactobacillus) (MicrobeWiki: Lactobacillus)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLactobacillus
SpeciesLactobacillus johnsonii
StrainFI9785

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Lactobacillus johnsonii FI9785
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature25
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementChains
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Lactobacillus johnsonii FI9785


Gene Summary

Adenine Count

9168 bp

Thymine Count

8692 bp

Guanine Count

3941 bp

Cytosine Count

3851 bp

Genome Length

25652 bp

Protein-coding Genes

27 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
para family proteinFI9785_RS08580Not Available+1 - 80730050.1
duf5388 domain-containing proteinFI9785_RS08585Not Available+800 - 110511512.6
duf6037 family proteinFI9785_RS08590Not Available+1378 - 199823468.3
replication initiation proteinFI9785_RS08595Not Available+2675 - 401853149.6
helix-turn-helix domain-containing proteinFI9785_RS08600Not Available+4361 - 520333128.6
hypothetical proteinFI9785_RS08605Not Available+5556 - 598116185.7
tyrosine-type recombinase/integraseFI9785_RS08610Not Available+6250 - 686124314.4
type iv toxin-antitoxin system abiei family antitoxin domain-containing proteinFI9785_RS08615Not Available+6974 - 756422635.0
nucleotidyl transferase abieii/abigii toxin family proteinFI9785_RS08620Not Available+7561 - 843634261.0
hypothetical proteinFI9785_RS08625Not Available-8590 - 938731749.1

Displaying genes 1 – 10 of 29 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites