Burkholderia glumae BGR1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia glumae causes grain and seedling rot in rice and bacterial wilt in many field crops; bacterial rice grain rot is becoming prevalent in many rice-growing countries, including China, Japan, Vietnam, the Philippines, India and the USA. The bacterium infects rice panicles at the flowering stage and causes serious yield losses when temperature and humidity are favorable for successful infection and in vivo proliferation. The bacterium produces yellow pigments, toxoflavin, reumycin, and fervenulin. Among these, toxoflavin is the most critical virulence factor of the bacterium. Strain BGR1 was isolated in Korea (adapted from PMID 19329631). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia glumae
StrainBGR1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Burkholderia glumae BGR1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipFree living
Host(s)Homo sapiens, Oryza sativa
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNo

Gene Summary

Adenine Count

25744 bp

Thymine Count

26427 bp

Guanine Count

45707 bp

Cytosine Count

43914 bp

Genome Length

141792 bp

Protein-coding Genes

121 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive119574 - 119585Not Available
AttlNot AvailableNot AvailablePositive123185 - 123197Not Available
Putative integraseBGLU_RS00515Not AvailableNegative123231 - 12426238732.7
dna-binding proteinBGLU_RS36685Not AvailableNegative124175 - 12445310085.2
Gp2BGLU_RS00520Not AvailableNegative125175 - 127970102087.0
Gp3BGLU_RS00525Not AvailableNegative127972 - 1282268690.39
Gp4BGLU_RS00530Not AvailableNegative128223 - 12858513094.5
Gp6BGLU_RS00535Not AvailableNegative128591 - 1287856729.58
Gp6BGLU_RS00540Not AvailableNegative128802 - 1290057794.29
Hypothetical proteinBGLU_RS00545Not AvailableNegative129008 - 1292207797.45

Displaying genes 1 – 10 of 3207 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial panicle blightCausesPMC7368126
Rice panicle blightCausesPMC7444824

Displaying health effects 1 – 2 of 2 in total