Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC plasmid pALIDE01, complete
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trae/trak family type iv conjugative transfer system protein | ALIDE_RS22055 | Not Available | Positive | 14557 - 15333 | 28512.0 |
| type-f conjugative transfer system secretin trak | ALIDE_RS22060 | Not Available | Positive | 15342 - 16475 | 39619.2 |
| trab/virb10 family protein | ALIDE_RS22065 | Not Available | Positive | 16472 - 17902 | 49577.6 |
| type iv conjugative transfer system lipoprotein trav | ALIDE_RS23690 | Not Available | Positive | 17908 - 18417 | 18657.9 |
| traa family conjugative transfer protein | ALIDE_RS22075 | Not Available | Positive | 18453 - 18788 | 11022.8 |
| type iv secretion system protein trac | ALIDE_RS22080 | Not Available | Positive | 18799 - 21243 | 91496.6 |
| hypothetical protein | ALIDE_RS22085 | Not Available | Positive | 21251 - 21745 | 17918.3 |
| signal peptidase i | ALIDE_RS22090 | Not Available | Positive | 21802 - 22407 | 22144.2 |
| trbc family f-type conjugative pilus assembly protein | ALIDE_RS22095 | Not Available | Positive | 22370 - 23554 | 44438.4 |
| trau family protein | ALIDE_RS22100 | Not Available | Positive | 23554 - 24708 | 41843.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
