Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC plasmid pALIDE01, complete
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygiq family radical sam protein | ALIDE_RS10915 | Not Available | Positive | 2248773 - 2251199 | 89862.4 |
| amino acid aminotransferase | ALIDE_RS10920 | Not Available | Negative | 2251309 - 2252505 | 42483.2 |
| excinuclease abc subunit uvrb | ALIDE_RS10925 | Not Available | Positive | 2252621 - 2254708 | 78961.3 |
| fe-s cluster assembly transcriptional regulator iscr | ALIDE_RS10930 | Not Available | Positive | 2254959 - 2255495 | 19365.4 |
| iscs subfamily cysteine desulfurase | ALIDE_RS10935 | Not Available | Positive | 2255571 - 2256791 | 44987.2 |
| fe-s cluster assembly scaffold iscu | ALIDE_RS10940 | Not Available | Positive | 2256814 - 2257215 | 14053.6 |
| iron-sulfur cluster assembly protein isca | ALIDE_RS10945 | Not Available | Positive | 2257223 - 2257546 | 11893.2 |
| fe-s protein assembly co-chaperone hscb | ALIDE_RS10950 | Not Available | Positive | 2257604 - 2258122 | 19443.9 |
| fe-s protein assembly chaperone hsca | ALIDE_RS10955 | Not Available | Positive | 2258159 - 2260027 | 65716.1 |
| isc system 2fe-2s type ferredoxin | ALIDE_RS10960 | Not Available | Positive | 2260063 - 2260401 | 12445.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
