Acidaminococcus intestini RyC-MR95 str. RYC-MR95

Gram-negativeCocciAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Acidaminococcales

Family

Acidaminococcaceae

Genus

Acidaminococcus

Description

Acidaminococcus intestini RyC-MR95 str. RYC-MR95 is a Gram-negative, anaerobic cocci that plays a role in the gut microbiome. This microbe is notable for its ability to thrive in an oxygen-deprived environment, which is characteristic of many members of the gut microbiota. The coccoid morphology of A. intestini suggests a potential for forming clusters, which may facilitate its survival and interaction with other microbial species in the intestinal niche. As an anaerobic bacterium, A. intestini is adapted to the low-oxygen conditions of the intestines, where it may contribute to various metabolic processes, including the fermentation of amino acids and production of short-chain fatty acids. Such metabolic activities can influence gut health and may play a role in regulating host metabolism. Understanding the properties of A. intestini, including its anaerobic nature and cocci shape, provides insights into the complex interactions within the intestinal microbiome. This microbe's adaptation to anaerobic conditions highlights the dynamic nature of microbial communities in the gut, emphasizing the importance of anaerobes in maintaining a balanced and functional microbiota that supports host health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderAcidaminococcales
FamilyAcidaminococcaceae
GenusAcidaminococcus
SpeciesAcidaminococcus intestini
StrainRyC-MR95 RYC-MR95

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidaminococcus intestini RyC-MR95, complete sequence.

Gene Summary

Adenine Count

617595 bp

Thymine Count

625775 bp

Guanine Count

621247 bp

Cytosine Count

623148 bp

Genome Length

2487765 bp

Protein-coding Genes

2186 genes

Non-Coding Genes

224 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is3 family transposaseACIN_RS12435Not AvailableNegative1003427 - 100426732094.6
transposase family proteinACIN_RS12810Not AvailableNegative1004361 - 10045858733.85
type ii crispr rna-guided endonuclease cas9ACIN_RS04615Not AvailablePositive1005026 - 1009102157547.0
type ii crispr-associated endonuclease cas1ACIN_RS04620Not AvailablePositive1009099 - 100997133793.8
crispr-associated endonuclease cas2ACIN_RS04625Not AvailablePositive1009983 - 101028811647.5
type ii-a crispr-associated protein csn2ACIN_RS04630Not AvailablePositive1010285 - 101095325644.5
upf0236 family transposase-like proteinACIN_RS04635Not AvailablePositive1014575 - 101560039877.4
hypothetical proteinACIN_RS04640Not AvailablePositive1015681 - 101602812624.5
hypothetical proteinACIN_RS12635Not AvailableNegative1016304 - 101677117301.7
nyn domain-containing proteinACIN_RS04650Not AvailablePositive1017251 - 101803929972.4

Displaying genes 1191 – 1200 of 2410 in total

Metabolites

677 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da

Displaying 1–10 of 677 metabolites

Health Effects

No health effects information available for this bacterium.