Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | SAMN04488124_3672 | Not Available | Negative | 3602452 - 3604179 | 64440.9 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN04488124_3673 | Not Available | Positive | 3604375 - 3605754 | 49505.6 |
| imidazolonepropionase | SAMN04488124_3674 | Not Available | Positive | 3605812 - 3606999 | 41509.4 |
| methyltransferase domain-containing protein | SAMN04488124_3675 | Not Available | Positive | 3607075 - 3607821 | 27659.6 |
| translation initiation factor 1a | SAMN04488124_3676 | Not Available | Positive | 3607936 - 3608223 | 11259.1 |
| hypothetical protein | SAMN04488124_3677 | Not Available | Negative | 3608314 - 3608661 | 13295.0 |
| hypothetical protein | SAMN04488124_3678 | Not Available | Positive | 3608755 - 3609270 | 18661.2 |
| winged helix-turn-helix dna-binding | SAMN04488124_3679 | Not Available | Positive | 3609385 - 3609657 | 10356.3 |
| hypothetical protein | SAMN04488124_3680 | Not Available | Negative | 3609722 - 3610579 | 31396.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.