Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . archaeal tsu | Not Available | Not Available | Positive | 166 - 287 | 18.01 |
| nucleoid protein mc1 | SAMN04488124_0001 | Not Available | Negative | 510 - 839 | 12389.4 |
| hypothetical protein | SAMN04488124_0002 | Not Available | Positive | 1056 - 1253 | 7342.61 |
| dihydroorotate oxidase a | SAMN04488124_0003 | Not Available | Positive | 1311 - 2369 | 37297.5 |
| hypothetical protein | SAMN04488124_0004 | Not Available | Positive | 2427 - 2633 | 6871.4 |
| valyl-trna synthetase | SAMN04488124_0005 | Not Available | Negative | 2670 - 5279 | 98789.7 |
| cystathionine gamma-synthase | SAMN04488124_0006 | Not Available | Negative | 5423 - 6628 | 43040.4 |
| acetyltransferase (isoleucine patch superfamily) | SAMN04488124_0007 | Not Available | Positive | 6723 - 7502 | 28679.0 |
| phenylalanyl-trna synthetase beta subunit | SAMN04488124_0008 | Not Available | Negative | 7528 - 9267 | 64617.0 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN04488124_0009 | Not Available | Negative | 9267 - 10772 | 55723.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.