Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum limi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
613622 bp
Thymine Count
621246 bp
Guanine Count
1187391 bp
Cytosine Count
1193980 bp
Genome Length
3616269 bp
Protein-coding Genes
3607 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488124_0010 | Not Available | Positive | 11300 - 11698 | 13601.1 |
| amphi-trp domain-containing protein | SAMN04488124_0011 | Not Available | Positive | 11780 - 12028 | 9073.75 |
| sarcosine oxidase subunit beta | SAMN04488124_0012 | Not Available | Negative | 12035 - 13186 | 40583.9 |
| alanine dehydrogenase | SAMN04488124_0013 | Not Available | Positive | 13271 - 14239 | 33852.6 |
| tryptophanyl-trna synthetase | SAMN04488124_0014 | Not Available | Negative | 14261 - 15877 | 59986.8 |
| pp_00015 | SAMN04488124_0015 | Not Available | Negative | 15874 - 16908 | Not Available |
| dna topoisomerase-1 | SAMN04488124_0016 | Not Available | Negative | 17007 - 17780 | 27466.2 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN04488124_0017 | Not Available | Positive | 17827 - 18477 | 23670.0 |
| replicative superfamily ii helicase | SAMN04488124_0018 | Not Available | Negative | 18496 - 20850 | 86475.5 |
| hypothetical protein | SAMN04488124_0019 | Not Available | Negative | 21295 - 21981 | 25733.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.