Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
942814 bp
Thymine Count
936281 bp
Guanine Count
1864106 bp
Cytosine Count
1868391 bp
Genome Length
5611602 bp
Protein-coding Genes
5357 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase subunit a | SAMN04487993_103610 | Not Available | Negative | 5173653 - 5174351 | 25020.2 |
| l,d-transpeptidase catalytic domain | SAMN04487993_103611 | Not Available | Negative | 5174462 - 5175013 | 20304.3 |
| dna topoisomerase i | SAMN04487993_103612 | Not Available | Negative | 5175130 - 5177829 | 98303.2 |
| dna protecting protein dpra | SAMN04487993_103613 | Not Available | Negative | 5177950 - 5179110 | 40483.1 |
| tldd protein | SAMN04487993_103614 | Not Available | Negative | 5179229 - 5180650 | 49356.8 |
| cytochrome c oxidase subunit 2 | SAMN04487993_103615 | Not Available | Positive | 5180838 - 5181719 | 31753.3 |
| protoheme ix farnesyltransferase | SAMN04487993_103616 | Not Available | Positive | 5181787 - 5182746 | 34368.3 |
| hypothetical protein | SAMN04487993_103617 | Not Available | Positive | 5182743 - 5182931 | 6683.24 |
| cytochrome c oxidase assembly protein subunit 11 | SAMN04487993_103618 | Not Available | Positive | 5182921 - 5183502 | 21472.4 |
| cytochrome c oxidase subunit 3 | SAMN04487993_103619 | Not Available | Positive | 5183531 - 5184337 | 30361.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
