Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Salipiger
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Salipiger |
| Species | Salipiger marinus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | marine-biofouling material |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
942814 bp
Thymine Count
936281 bp
Guanine Count
1864106 bp
Cytosine Count
1868391 bp
Genome Length
5611602 bp
Protein-coding Genes
5357 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN04487993_1004196 | Not Available | Positive | 1254866 - 1255780 | 33819.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN04487993_1004197 | Not Available | Positive | 1255946 - 1256950 | 35035.5 |
| tripartite tricarboxylate transporter tctb family protein | SAMN04487993_1004198 | Not Available | Positive | 1257059 - 1257631 | 20187.5 |
| putative tricarboxylic transport membrane protein | SAMN04487993_1004199 | Not Available | Positive | 1257631 - 1259133 | 53042.6 |
| shikimate dehydrogenase | SAMN04487993_1004200 | Not Available | Positive | 1259130 - 1259963 | 29358.3 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN04487993_1004201 | Not Available | Positive | 1260003 - 1261889 | 68798.7 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN04487993_1004202 | Not Available | Negative | 1261898 - 1262965 | 37186.8 |
| protocatechuate 3,4-dioxygenase, alpha subunit | SAMN04487993_1004203 | Not Available | Negative | 1262955 - 1263554 | 21485.5 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN04487993_1004204 | Not Available | Negative | 1263558 - 1264301 | 27830.2 |
| 4-carboxymuconolactone decarboxylase | SAMN04487993_1004205 | Not Available | Negative | 1264298 - 1264681 | 14020.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
