Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_00255 | Not Available | Positive | 54131 - 54601 | 17865.3 |
| hypothetical protein | N824_00260 | Not Available | Positive | 54618 - 55616 | 38323.1 |
| hypothetical protein | N824_00265 | Not Available | Positive | 55613 - 56470 | 32577.9 |
| hypothetical protein | N824_00270 | Not Available | Positive | 56475 - 56981 | 19825.0 |
| hypothetical protein | N824_00275 | Not Available | Negative | 56959 - 57870 | 34947.8 |
| abc transporter atp-binding protein | N824_00280 | Not Available | Negative | 57909 - 59675 | 65795.5 |
| hypothetical protein | N824_00285 | Not Available | Positive | 59724 - 60212 | 18668.7 |
| hypothetical protein | N824_00290 | Not Available | Negative | 60276 - 60887 | 23500.4 |
| hypothetical protein | N824_00295 | Not Available | Positive | 61355 - 62452 | 41885.0 |
| hypothetical protein | N824_00300 | Not Available | Negative | 62455 - 62784 | 13027.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

