Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_13715 | Not Available | Positive | 590506 - 591048 | 20042.1 |
| gdp-l-fucose synthase | N824_13720 | Not Available | Negative | 591118 - 592050 | 34713.8 |
| hypothetical protein | N824_13725 | Not Available | Negative | 592047 - 592796 | 28193.4 |
| gdp-mannose 4,6-dehydratase | N824_13730 | Not Available | Negative | 592808 - 593920 | 41939.2 |
| udp-glucose 6-dehydrogenase | N824_13735 | Not Available | Positive | 594353 - 595774 | 52573.0 |
| hypothetical protein | N824_13740 | Not Available | Positive | 595813 - 596754 | 34928.5 |
| hypothetical protein | N824_13745 | Not Available | Negative | 596751 - 598259 | 55879.5 |
| hypothetical protein | N824_13750 | Not Available | Positive | 598799 - 600133 | 51164.6 |
| hypothetical protein | N824_13755 | Not Available | Positive | 600153 - 601229 | 40290.1 |
| hypothetical protein | N824_13760 | Not Available | Positive | 601447 - 604680 | 117422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

