Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_13565 | Not Available | Positive | 552903 - 553676 | 29385.2 |
| hypothetical protein | N824_13570 | Not Available | Positive | 553780 - 554793 | 37349.2 |
| hypothetical protein | N824_13575 | Not Available | Positive | 554796 - 555890 | 41023.1 |
| nucleotidyl transferase | N824_13580 | Not Available | Positive | 555895 - 556941 | 40109.2 |
| hypothetical protein | N824_13585 | Not Available | Positive | 556892 - 557626 | 28130.7 |
| hypothetical protein | N824_13590 | Not Available | Positive | 558114 - 559520 | 53143.1 |
| hypothetical protein | N824_13595 | Not Available | Positive | 559507 - 560859 | 52395.4 |
| hypothetical protein | N824_13600 | Not Available | Positive | 560869 - 561531 | 24258.2 |
| hypothetical protein | N824_13605 | Not Available | Positive | 561543 - 562610 | 42075.8 |
| hypothetical protein | N824_13610 | Not Available | Positive | 562611 - 563894 | 48346.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

