Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_13515 | Not Available | Negative | 540855 - 542246 | 51896.8 |
| hypothetical protein | N824_13520 | Not Available | Negative | 542266 - 543195 | 35778.6 |
| hypothetical protein | N824_13525 | Not Available | Negative | 543188 - 544450 | 48174.1 |
| hypothetical protein | N824_13530 | Not Available | Positive | 544525 - 545919 | 53598.2 |
| hypothetical protein | N824_13535 | Not Available | Negative | 545894 - 546634 | 28125.7 |
| hypothetical protein | N824_13540 | Not Available | Positive | 546878 - 547618 | 26729.2 |
| hypothetical protein | N824_13545 | Not Available | Positive | 547632 - 550016 | 88609.4 |
| vi polysaccharide biosynthesis protein vipa/tvib | N824_13550 | Not Available | Positive | 550027 - 551328 | 47985.8 |
| udp-n-acetylglucosamine 4,6-dehydratase | N824_13555 | Not Available | Positive | 551343 - 552530 | 45463.6 |
| hypothetical protein | N824_13560 | Not Available | Positive | 552532 - 552939 | 14276.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

