Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_13360 | Not Available | Positive | 507514 - 508188 | 25766.5 |
| hypothetical protein | N824_13365 | Not Available | Positive | 508172 - 509044 | 33307.0 |
| hypothetical protein | N824_13370 | Not Available | Positive | 509035 - 509790 | 28513.4 |
| hypothetical protein | N824_13375 | Not Available | Positive | 509783 - 511102 | 48946.6 |
| hypothetical protein | N824_13380 | Not Available | Positive | 511105 - 512541 | 54282.7 |
| n-acetylneuraminate synthase | N824_13385 | Not Available | Positive | 512538 - 513575 | 38562.1 |
| hypothetical protein | N824_13390 | Not Available | Positive | 513575 - 514846 | 48269.1 |
| hypothetical protein | N824_13395 | Not Available | Positive | 514843 - 516375 | 55984.3 |
| hypothetical protein | N824_13400 | Not Available | Positive | 516450 - 516989 | 21152.4 |
| hypothetical protein | N824_13405 | Not Available | Positive | 516995 - 518227 | 47333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

