Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_13310 | Not Available | Positive | 496671 - 497288 | 22658.0 |
| hypothetical protein | N824_13315 | Not Available | Positive | 497525 - 498139 | 23177.1 |
| hypothetical protein | N824_13320 | Not Available | Positive | 498140 - 498562 | 16435.0 |
| hypothetical protein | N824_13325 | Not Available | Positive | 498716 - 499543 | 31619.8 |
| hypothetical protein | N824_13330 | Not Available | Positive | 499610 - 500242 | 24175.5 |
| gdp-mannose 4,6-dehydratase | N824_13335 | Not Available | Positive | 500426 - 501562 | 43113.6 |
| hypothetical protein | N824_13340 | Not Available | Positive | 501722 - 504157 | 89847.1 |
| hypothetical protein | N824_13345 | Not Available | Positive | 504188 - 505285 | 40599.0 |
| n-acetyl glucosamine/n-acetyl galactosamine epimerase | N824_13350 | Not Available | Positive | 505321 - 506331 | 37775.4 |
| pyridoxal-5'-phosphate-dependent protein | N824_13355 | Not Available | Positive | 506337 - 507524 | 44604.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

