Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | N824_13060 | Not Available | Negative | 441454 - 442203 | 28788.4 |
| glycosyl transferase family 1 | N824_13065 | Not Available | Negative | 442224 - 443495 | 47481.8 |
| methyltransferase type 12 | N824_13070 | Not Available | Positive | 443667 - 444416 | 28855.8 |
| sugar transferase | N824_13075 | Not Available | Negative | 444421 - 445320 | 34482.2 |
| hypothetical protein | N824_13080 | Not Available | Negative | 445325 - 445948 | 23917.6 |
| hypothetical protein | N824_13085 | Not Available | Negative | 446031 - 447371 | 49820.2 |
| hypothetical protein | N824_13090 | Not Available | Negative | 447396 - 447785 | 13189.5 |
| hypothetical protein | N824_13095 | Not Available | Negative | 447815 - 448594 | 29309.2 |
| haloacid dehalogenase | N824_13100 | Not Available | Negative | 448609 - 449298 | 26484.4 |
| uracil phosphoribosyltransferase | N824_13105 | Not Available | Negative | 449311 - 449955 | 23913.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

