Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit k | N824_12910 | Not Available | Positive | 414726 - 415046 | 11789.8 |
| nadh dehydrogenase subunit l | N824_12915 | Not Available | Positive | 415066 - 416961 | 68964.9 |
| nadh dehydrogenase subunit m | N824_12920 | Not Available | Positive | 416983 - 418449 | 53618.2 |
| nadh dehydrogenase subunit n | N824_12925 | Not Available | Positive | 418454 - 419827 | 50288.0 |
| alkaline phosphatase | N824_12930 | Not Available | Positive | 419873 - 420535 | 25197.3 |
| inorganic pyrophosphatase | N824_12935 | Not Available | Positive | 420544 - 421098 | 21040.2 |
| hypothetical protein | N824_12940 | Not Available | Positive | 421098 - 422414 | 48981.2 |
| 16s rrna methyltransferase | N824_12945 | Not Available | Positive | 422426 - 423130 | 26716.1 |
| hypothetical protein | N824_12950 | Not Available | Positive | 423127 - 423783 | 24920.7 |
| hypothetical protein | N824_12955 | Not Available | Positive | 423786 - 424283 | 18330.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

