Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_12660 | Not Available | Positive | 367387 - 367752 | 13877.3 |
| hypothetical protein | N824_12665 | Not Available | Positive | 367886 - 368251 | 13467.4 |
| hypothetical protein | N824_12670 | Not Available | Negative | 368243 - 368407 | 5885.12 |
| hypothetical protein | N824_12675 | Not Available | Positive | 368444 - 368767 | 12501.8 |
| hypothetical protein | N824_12680 | Not Available | Negative | 368981 - 369220 | 9042.97 |
| hypothetical protein | N824_12685 | Not Available | Positive | 369348 - 369734 | 14211.1 |
| cold-shock protein | N824_12690 | Not Available | Positive | 370072 - 370260 | 6921.26 |
| hypothetical protein | N824_12695 | Not Available | Positive | 370654 - 370869 | 8181.78 |
| hypothetical protein | N824_12700 | Not Available | Positive | 370863 - 371234 | 14228.5 |
| hypothetical protein | N824_12705 | Not Available | Positive | 371331 - 371435 | 3836.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

