Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 6901 - 6974 | Not Available |
| aldo/keto reductase | N824_00060 | Not Available | Negative | 7532 - 8440 | 34202.1 |
| hypothetical protein | N824_00065 | Not Available | Positive | 8764 - 8949 | 6773.3 |
| hypothetical protein | N824_00070 | Not Available | Negative | 8958 - 9326 | 13939.1 |
| hypothetical protein | N824_00075 | Not Available | Negative | 9524 - 9829 | 11297.4 |
| hypothetical protein | N824_00080 | Not Available | Negative | 9853 - 10341 | 15328.2 |
| hypothetical protein | N824_00085 | Not Available | Negative | 10370 - 11608 | 43606.9 |
| hypothetical protein | N824_00090 | Not Available | Positive | 11805 - 12245 | 13064.0 |
| hypothetical protein | N824_00095 | Not Available | Positive | 12276 - 12419 | 5725.13 |
| hypothetical protein | N824_00100 | Not Available | Positive | 12416 - 12760 | 13318.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

