Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_01245 | Not Available | Negative | 313991 - 314584 | 23532.7 |
| hypothetical protein | N824_01250 | Not Available | Negative | 314716 - 314955 | 9078.0 |
| hypothetical protein | N824_01255 | Not Available | Negative | 315063 - 315323 | 9885.07 |
| hypothetical protein | N824_01260 | Not Available | Negative | 315320 - 315586 | 10088.1 |
| hypothetical protein | N824_01265 | Not Available | Positive | 315882 - 316004 | 4756.04 |
| hypothetical protein | N824_01270 | Not Available | Negative | 316028 - 316762 | 27261.5 |
| hypothetical protein | N824_01275 | Not Available | Negative | 316749 - 317075 | 12148.4 |
| hypothetical protein | N824_01280 | Not Available | Negative | 317940 - 318404 | 17065.7 |
| hypothetical protein | N824_01285 | Not Available | Negative | 318386 - 319534 | 41740.5 |
| beta-xylosidase | N824_01290 | Not Available | Negative | 319557 - 321089 | 57241.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

