Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_01095 | Not Available | Positive | 282840 - 283772 | 36077.5 |
| transglutaminase | N824_01100 | Not Available | Positive | 283778 - 284761 | 37941.1 |
| hypothetical protein | N824_01105 | Not Available | Negative | 284783 - 285151 | 13576.8 |
| hypothetical protein | N824_01110 | Not Available | Negative | 285166 - 285903 | 27415.5 |
| hypothetical protein | N824_01115 | Not Available | Negative | 285973 - 286416 | 16315.4 |
| hypothetical protein | N824_01120 | Not Available | Negative | 286525 - 287322 | 30686.8 |
| hypothetical protein | N824_01125 | Not Available | Positive | 287432 - 287785 | 13747.4 |
| hypothetical protein | N824_01130 | Not Available | Positive | 287788 - 288234 | 17405.4 |
| hypothetical protein | N824_01135 | Not Available | Negative | 288357 - 288488 | 4949.76 |
| hypothetical protein | N824_01140 | Not Available | Negative | 288513 - 288755 | 9396.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

