Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | N824_21655 | Not Available | Positive | 2314676 - 2315341 | 25053.3 |
| fosmidomycin resistance protein | N824_21660 | Not Available | Positive | 2315382 - 2316614 | 44423.4 |
| hypothetical protein | N824_21665 | Not Available | Negative | 2316675 - 2318273 | 59525.6 |
| hypothetical protein | N824_21670 | Not Available | Negative | 2318283 - 2321345 | 112191.0 |
| hypothetical protein | N824_21675 | Not Available | Negative | 2321432 - 2322472 | 40024.5 |
| hypothetical protein | N824_21680 | Not Available | Negative | 2322513 - 2323142 | 24673.9 |
| hypothetical protein | N824_21685 | Not Available | Positive | 2323425 - 2326586 | 113849.0 |
| hypothetical protein | N824_21690 | Not Available | Positive | 2326599 - 2328176 | 58707.6 |
| radical sam protein | N824_21695 | Not Available | Positive | 2328349 - 2329542 | 46019.9 |
| phosphoglycerate mutase | N824_21700 | Not Available | Positive | 2329542 - 2330153 | 23003.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

