Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_21450 | Not Available | Positive | 2275144 - 2275929 | 30360.2 |
| hypothetical protein | N824_21455 | Not Available | Positive | 2276040 - 2276228 | 7194.64 |
| hypothetical protein | N824_21460 | Not Available | Positive | 2276298 - 2276483 | 6935.45 |
| hypothetical protein | N824_21465 | Not Available | Negative | 2276852 - 2277121 | 9897.15 |
| hypothetical protein | N824_21470 | Not Available | Negative | 2277343 - 2278071 | 27863.6 |
| ribonuclease bn | N824_21480 | Not Available | Negative | 2278504 - 2279496 | 37549.0 |
| thioesterase | N824_21485 | Not Available | Negative | 2279506 - 2279913 | 15689.1 |
| aminodeoxychorismate lyase | N824_21490 | Not Available | Negative | 2279913 - 2280971 | 40255.6 |
| protein pasta domain-containing protein | N824_21495 | Not Available | Negative | 2280990 - 2281760 | 28029.9 |
| hypothetical protein | N824_21500 | Not Available | Negative | 2281736 - 2281936 | 7348.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

