Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_21090 | Not Available | Negative | 2207892 - 2208386 | 18495.4 |
| hypothetical protein | N824_21095 | Not Available | Negative | 2208364 - 2208804 | 17578.5 |
| hypothetical protein | N824_21100 | Not Available | Negative | 2209302 - 2209637 | 12590.9 |
| hypothetical protein | N824_21105 | Not Available | Negative | 2209748 - 2211013 | 48259.7 |
| transcription initiation protein | N824_21110 | Not Available | Negative | 2211013 - 2211354 | 12751.3 |
| hypothetical protein | N824_21115 | Not Available | Positive | 2211383 - 2211574 | 7350.99 |
| hypothetical protein | N824_21125 | Not Available | Negative | 2212888 - 2213241 | 13459.7 |
| hypothetical protein | N824_21130 | Not Available | Positive | 2213327 - 2213929 | 20337.6 |
| hypothetical protein | N824_21135 | Not Available | Negative | 2214641 - 2215099 | 16859.1 |
| hypothetical protein | N824_21140 | Not Available | Positive | 2215408 - 2215581 | 6550.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

