Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine amidotransferase | N824_20990 | Not Available | Negative | 2187590 - 2188153 | 20336.1 |
| endo-1,4-beta-xylanase | N824_20995 | Not Available | Negative | 2188490 - 2189935 | 52680.9 |
| fatty acid hydroxylase | N824_21000 | Not Available | Positive | 2190206 - 2190898 | 27535.0 |
| hypothetical protein | N824_21005 | Not Available | Positive | 2191132 - 2191674 | 20736.8 |
| hypothetical protein | N824_21010 | Not Available | Positive | 2192314 - 2192898 | 22611.7 |
| hypothetical protein | N824_21015 | Not Available | Positive | 2193119 - 2195476 | 87530.6 |
| hypothetical protein | N824_21020 | Not Available | Negative | 2195560 - 2198103 | 96327.3 |
| hypothetical protein | N824_21025 | Not Available | Positive | 2198421 - 2198852 | 15835.9 |
| hypothetical protein | N824_21030 | Not Available | Negative | 2199071 - 2199808 | 28639.3 |
| hypothetical protein | N824_21035 | Not Available | Negative | 2199927 - 2200307 | 11138.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

