Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_20935 | Not Available | Positive | 2180775 - 2181836 | 40044.7 |
| hypothetical protein | N824_20940 | Not Available | Positive | 2181931 - 2182188 | 10382.4 |
| hypothetical protein | N824_20945 | Not Available | Negative | 2182248 - 2183699 | 54888.3 |
| hypothetical protein | N824_20950 | Not Available | Negative | 2183839 - 2184201 | 13799.8 |
| hypothetical protein | N824_20955 | Not Available | Positive | 2184304 - 2184480 | 6413.83 |
| hypothetical protein | N824_20960 | Not Available | Negative | 2184585 - 2184779 | 7176.34 |
| hxlr family transcriptional regulator | N824_20965 | Not Available | Positive | 2184916 - 2185281 | 14140.5 |
| short-chain dehydrogenase | N824_20970 | Not Available | Negative | 2185379 - 2186173 | 28227.3 |
| hypothetical protein | N824_20975 | Not Available | Negative | 2186531 - 2186749 | 8079.29 |
| hypothetical protein | N824_20980 | Not Available | Negative | 2186858 - 2187166 | 11358.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

