Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_20730 | Not Available | Negative | 2148388 - 2148519 | 4743.54 |
| hypothetical protein | N824_20735 | Not Available | Negative | 2148746 - 2149174 | 16542.2 |
| hypothetical protein | N824_20740 | Not Available | Negative | 2149314 - 2149508 | 7426.47 |
| hypothetical protein | N824_20745 | Not Available | Negative | 2150003 - 2150584 | 21060.1 |
| hypothetical protein | N824_20750 | Not Available | Negative | 2150774 - 2151196 | 15942.8 |
| bifunctional pyrazinamidase/nicotinamidase | N824_20755 | Not Available | Negative | 2151254 - 2151844 | 21702.8 |
| hypothetical protein | N824_20760 | Not Available | Positive | 2152011 - 2152322 | 12222.8 |
| hypothetical protein | N824_20765 | Not Available | Positive | 2152970 - 2153707 | 26992.8 |
| hypothetical protein | N824_20770 | Not Available | Positive | 2153719 - 2155227 | 56490.0 |
| dna polymerase | N824_20775 | Not Available | Positive | 2155242 - 2158472 | 121534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

