Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_20580 | Not Available | Positive | 2121391 - 2123160 | 63158.3 |
| hypothetical protein | N824_20585 | Not Available | Positive | 2123108 - 2124655 | 54378.8 |
| hypothetical protein | N824_20590 | Not Available | Positive | 2124687 - 2126462 | 65699.6 |
| hypothetical protein | N824_20595 | Not Available | Positive | 2126498 - 2127280 | 30014.7 |
| hypothetical protein | N824_20600 | Not Available | Positive | 2127277 - 2129343 | 78093.8 |
| hypothetical protein | N824_20605 | Not Available | Negative | 2129329 - 2129481 | 5640.12 |
| hypothetical protein | N824_20610 | Not Available | Negative | 2129769 - 2130098 | 11726.2 |
| hypothetical protein | N824_20615 | Not Available | Negative | 2130189 - 2131100 | 34951.3 |
| pduo protein | N824_20620 | Not Available | Positive | 2131297 - 2131707 | 14093.8 |
| aldehyde dismutase | N824_20625 | Not Available | Positive | 2131719 - 2132906 | 41793.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

