Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_20375 | Not Available | Positive | 2082617 - 2083174 | 19843.7 |
| hypothetical protein | N824_20380 | Not Available | Positive | 2083171 - 2085378 | 83063.4 |
| hypothetical protein | N824_20385 | Not Available | Positive | 2085398 - 2086576 | 44158.2 |
| histidinol dehydrogenase | N824_20390 | Not Available | Positive | 2086608 - 2087897 | 46822.4 |
| hypothetical protein | N824_20395 | Not Available | Positive | 2087887 - 2089314 | 53119.8 |
| hypothetical protein | N824_20400 | Not Available | Positive | 2089373 - 2091577 | 83204.6 |
| hypothetical protein | N824_20405 | Not Available | Positive | 2091620 - 2092558 | 36535.0 |
| hypothetical protein | N824_20410 | Not Available | Positive | 2092688 - 2093050 | 12693.7 |
| hypothetical protein | N824_20415 | Not Available | Positive | 2093032 - 2093502 | 16227.6 |
| hypothetical protein | N824_20420 | Not Available | Negative | 2093547 - 2094572 | 39480.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

