Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_20170 | Not Available | Positive | 2044349 - 2047348 | 111974.0 |
| hypothetical protein | N824_20175 | Not Available | Positive | 2047358 - 2048230 | 32158.5 |
| hypothetical protein | N824_20180 | Not Available | Positive | 2048148 - 2048792 | 22421.2 |
| exodeoxyribonuclease iii | N824_20185 | Not Available | Negative | 2048785 - 2049567 | 29960.8 |
| hypothetical protein | N824_20190 | Not Available | Negative | 2049665 - 2049865 | 7871.3 |
| hypothetical protein | N824_20195 | Not Available | Negative | 2049885 - 2050667 | 26473.2 |
| cyclase | N824_20200 | Not Available | Positive | 2050843 - 2051739 | 33719.2 |
| hypothetical protein | N824_20205 | Not Available | Positive | 2051838 - 2054222 | 93660.2 |
| hypothetical protein | N824_20210 | Not Available | Negative | 2054235 - 2054888 | 24662.2 |
| hypothetical protein | N824_20215 | Not Available | Negative | 2054913 - 2055710 | 29907.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

