Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter substrate-binding protein | N824_20120 | Not Available | Positive | 2028483 - 2029301 | 29608.8 |
| hypothetical protein | N824_20125 | Not Available | Positive | 2029421 - 2031886 | 92528.7 |
| hypothetical protein | N824_20130 | Not Available | Positive | 2031935 - 2032711 | 29700.3 |
| hypothetical protein | N824_20135 | Not Available | Negative | 2032723 - 2033601 | 33803.6 |
| hypothetical protein | N824_20140 | Not Available | Positive | 2033837 - 2036512 | 99789.2 |
| hypothetical protein | N824_20145 | Not Available | Positive | 2036580 - 2037323 | 27455.8 |
| hypothetical protein | N824_20150 | Not Available | Positive | 2037671 - 2038555 | 31928.5 |
| hypothetical protein | N824_20155 | Not Available | Negative | 2038566 - 2039459 | 34224.6 |
| hypothetical protein | N824_20160 | Not Available | Positive | 2039675 - 2042767 | 112754.0 |
| hypothetical protein | N824_20165 | Not Available | Positive | 2042783 - 2044291 | 56206.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

