Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_20020 | Not Available | Negative | 2005420 - 2006187 | 28760.0 |
| hypothetical protein | N824_20025 | Not Available | Positive | 2006564 - 2008573 | 75789.4 |
| alpha-galactosidase | N824_20030 | Not Available | Positive | 2008593 - 2010758 | 82325.0 |
| tonb-denpendent receptor | N824_20035 | Not Available | Positive | 2010880 - 2013981 | 111466.0 |
| membrane protein | N824_20040 | Not Available | Positive | 2014005 - 2015711 | 62843.3 |
| glycoside hydrolase | N824_20045 | Not Available | Positive | 2015758 - 2017329 | 56340.5 |
| glycosyl hydrolase | N824_20050 | Not Available | Positive | 2017340 - 2018485 | 43700.4 |
| sorbosone dehydrogenase | N824_20055 | Not Available | Positive | 2018555 - 2019850 | 47549.4 |
| hypothetical protein | N824_20060 | Not Available | Positive | 2019859 - 2020305 | 16096.8 |
| hypothetical protein | N824_20065 | Not Available | Negative | 2020554 - 2021039 | 16988.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

