Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_19920 | Not Available | Positive | 1978277 - 1979374 | 40727.1 |
| hypothetical protein | N824_19925 | Not Available | Negative | 1979429 - 1979728 | 11000.4 |
| hypothetical protein | N824_19930 | Not Available | Negative | 1979738 - 1980454 | 27519.5 |
| phospholipase | N824_19935 | Not Available | Negative | 1980480 - 1981109 | 22894.6 |
| diguanylate cyclase | N824_19940 | Not Available | Negative | 1981111 - 1982046 | 34844.4 |
| membrane protein | N824_19945 | Not Available | Positive | 1982171 - 1984705 | 96529.0 |
| hypothetical protein | N824_19950 | Not Available | Positive | 1984850 - 1985410 | 21391.1 |
| tonb-dependent receptor | N824_19955 | Not Available | Positive | 1985529 - 1987895 | 87102.8 |
| hypothetical protein | N824_19960 | Not Available | Positive | 1988000 - 1989853 | 69907.2 |
| hypothetical protein | N824_19965 | Not Available | Positive | 1989855 - 1992053 | 82903.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

