Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_19820 | Not Available | Negative | 1952236 - 1952556 | 12263.6 |
| hypothetical protein | N824_19825 | Not Available | Negative | 1952594 - 1952908 | 12250.7 |
| hypothetical protein | N824_19830 | Not Available | Negative | 1952998 - 1953237 | 9083.05 |
| hypothetical protein | N824_19835 | Not Available | Positive | 1953380 - 1953967 | 22479.4 |
| hypothetical protein | N824_19840 | Not Available | Negative | 1953985 - 1955214 | 46598.4 |
| 6-phosphogluconolactonase | N824_19845 | Not Available | Negative | 1955346 - 1956071 | 26787.9 |
| glucose 6-phosphate dehydrogenase | N824_19850 | Not Available | Negative | 1956071 - 1957582 | 57491.9 |
| 6-phosphogluconate dehydrogenase | N824_19855 | Not Available | Negative | 1957620 - 1959032 | 52539.1 |
| plasmid partitioning protein para | N824_19860 | Not Available | Negative | 1959037 - 1959801 | 27858.4 |
| hypothetical protein | N824_19865 | Not Available | Positive | 1960518 - 1963523 | 112578.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

