Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_00705 | Not Available | Positive | 168505 - 169620 | 43129.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 170956 - 171067 | Not Available |
| hypothetical protein | N824_00710 | Not Available | Negative | 169697 - 171001 | 49485.9 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 171178 - 174056 | Not Available |
| hypothetical protein | N824_00715 | Not Available | Negative | 171130 - 172821 | 63641.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 174562 - 176089 | Not Available |
| hypothetical protein | N824_00720 | Not Available | Negative | 172833 - 176201 | 125027.0 |
| hypothetical protein | N824_00725 | Not Available | Negative | 176451 - 177611 | 43580.8 |
| hypothetical protein | N824_00730 | Not Available | Positive | 177851 - 178441 | 23341.2 |
| hypothetical protein | N824_00735 | Not Available | Negative | 178626 - 180101 | 53591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

