Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_00655 | Not Available | Negative | 156835 - 158736 | 70795.8 |
| hypothetical protein | N824_00660 | Not Available | Negative | 158876 - 159997 | 36768.5 |
| short-chain dehydrogenase | N824_00665 | Not Available | Negative | 160193 - 160945 | 26612.9 |
| mfs transporter | N824_00670 | Not Available | Negative | 160963 - 162225 | 46051.4 |
| mandelate racemase | N824_00675 | Not Available | Negative | 162242 - 163483 | 46752.2 |
| hypothetical protein | N824_00680 | Not Available | Negative | 163572 - 164255 | 26182.6 |
| hypothetical protein | N824_00685 | Not Available | Positive | 164271 - 164411 | 5628.81 |
| mechanosensitive ion channel protein | N824_00690 | Not Available | Positive | 164490 - 166856 | 89418.5 |
| hypothetical protein | N824_00695 | Not Available | Negative | 166804 - 167349 | 19416.5 |
| hypothetical protein | N824_00700 | Not Available | Negative | 167350 - 168300 | 35602.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

