Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18405 | Not Available | Positive | 1641193 - 1643571 | 88702.1 |
| iron abc transporter | N824_18410 | Not Available | Positive | 1643640 - 1644437 | 30708.2 |
| hypothetical protein | N824_18415 | Not Available | Negative | 1644479 - 1645003 | 19143.1 |
| hypothetical protein | N824_18420 | Not Available | Negative | 1645049 - 1647463 | 90431.3 |
| prolyl endopeptidase | N824_18425 | Not Available | Positive | 1647640 - 1649778 | 79118.8 |
| hypothetical protein | N824_18430 | Not Available | Positive | 1649993 - 1650106 | 4528.65 |
| Trna-leu | Not Available | Not Available | Positive | 1650235 - 1650316 | Not Available |
| peptidylprolyl isomerase | N824_18440 | Not Available | Positive | 1650387 - 1651733 | 51351.1 |
| atp-dependent clp protease clpp | N824_18445 | Not Available | Positive | 1651952 - 1652647 | 25742.1 |
| hypothetical protein | N824_18450 | Not Available | Positive | 1652650 - 1653153 | 17538.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

