Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_18105 | Not Available | Positive | 1561602 - 1562546 | 35071.3 |
| hypothetical protein | N824_18110 | Not Available | Positive | 1562907 - 1563221 | 11036.1 |
| hypothetical protein | N824_18115 | Not Available | Positive | 1563384 - 1564160 | 28968.9 |
| hypothetical protein | N824_18120 | Not Available | Positive | 1564166 - 1566796 | 98109.7 |
| cupin | N824_18125 | Not Available | Negative | 1566849 - 1567364 | 18714.5 |
| hypothetical protein | N824_18130 | Not Available | Negative | 1567427 - 1568569 | 44045.8 |
| ferric aerobactin receptor | N824_18135 | Not Available | Negative | 1568572 - 1570965 | 86386.2 |
| hypothetical protein | N824_18140 | Not Available | Positive | 1571118 - 1572335 | 44789.7 |
| hypothetical protein | N824_18145 | Not Available | Negative | 1572364 - 1573611 | 47375.0 |
| hypothetical protein | N824_18150 | Not Available | Negative | 1573704 - 1574045 | 12453.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

