Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N824_00605 | Not Available | Negative | 146130 - 147536 | 52766.0 |
| hypothetical protein | N824_00610 | Not Available | Negative | 147548 - 147859 | 12180.3 |
| hypothetical protein | N824_00615 | Not Available | Negative | 147998 - 148114 | 3724.53 |
| hypothetical protein | N824_00620 | Not Available | Negative | 148116 - 148631 | 16922.5 |
| hypothetical protein | N824_00625 | Not Available | Negative | 148661 - 149302 | 23513.8 |
| arac family transcriptional regulator | N824_00630 | Not Available | Positive | 149455 - 150327 | 33742.9 |
| hypothetical protein | N824_00635 | Not Available | Negative | 150340 - 151602 | 46767.7 |
| hypothetical protein | N824_00640 | Not Available | Negative | 151625 - 153007 | 52728.5 |
| hypothetical protein | N824_00645 | Not Available | Negative | 153014 - 154894 | 70191.7 |
| hypothetical protein | N824_00650 | Not Available | Negative | 154960 - 156816 | 68050.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

