Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. V48 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sand; sand microcosms |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1961672 bp
Thymine Count
1971998 bp
Guanine Count
1248287 bp
Cytosine Count
1255921 bp
Genome Length
6459990 bp
Protein-coding Genes
5839 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | N824_00555 | Not Available | Negative | 130560 - 132026 | 54898.9 |
| membrane protein | N824_00560 | Not Available | Negative | 132056 - 135304 | 117935.0 |
| hypothetical protein | N824_00565 | Not Available | Positive | 136548 - 137942 | 51704.9 |
| hypothetical protein | N824_00570 | Not Available | Positive | 138014 - 138571 | 21781.8 |
| hypothetical protein | N824_00575 | Not Available | Positive | 138664 - 139653 | 37401.9 |
| hypothetical protein | N824_00580 | Not Available | Positive | 139777 - 143106 | 125372.0 |
| hypothetical protein | N824_00585 | Not Available | Positive | 143111 - 143887 | 28400.2 |
| hypothetical protein | N824_00590 | Not Available | Positive | 144028 - 145467 | 49219.3 |
| hypothetical protein | N824_00595 | Not Available | Positive | 145445 - 145576 | 5231.75 |
| atpase | N824_00600 | Not Available | Positive | 145686 - 146126 | 16426.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

