Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | TZ53_RS02890 | Not Available | Negative | 595739 - 596098 | 12595.0 |
| response regulator | TZ53_RS02895 | Not Available | Negative | 596190 - 598616 | 86042.5 |
| duf2062 domain-containing protein | TZ53_RS02900 | Not Available | Negative | 598665 - 599258 | 21919.0 |
| ssra-binding protein smpb | TZ53_RS02905 | Not Available | Negative | 599258 - 599740 | 18709.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | TZ53_RS02910 | Not Available | Negative | 599785 - 600663 | 31112.0 |
| lytic transglycosylase domain-containing protein | TZ53_RS02915 | Not Available | Positive | 600833 - 602869 | 73672.0 |
| transcription elongation factor greb | TZ53_RS02920 | Not Available | Positive | 602890 - 603375 | 17918.2 |
| hypothetical protein | TZ53_RS02925 | Not Available | Negative | 603414 - 603599 | 6741.15 |
| methyl-accepting chemotaxis protein | TZ53_RS02930 | Not Available | Negative | 603667 - 604923 | 43659.6 |
| polyphosphate kinase 2 family protein | TZ53_RS02935 | Not Available | Negative | 605067 - 605849 | 30434.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
